REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats

10.1186/s13073-022-01085-z

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Main Authors: Dolzhenko, E, Weisburd, B, Ibañez, K, Rajan-Babu, IS, Anyansi, C, Bennett, MF, Billingsley, K, Carroll, A, Clamons, S, Danzi, MC, Deshpande, V, Ding, J, Fazal, S, Halman, A, Jadhav, B, Qiu, Y, Richmond, PA, Saunders, CT, Scheffler, K, van Vugt, JJFA, Zwamborn, RRAJ, Chong, SS, Friedman, JM, Tucci, A, Rehm, HL, Eberle, MA
Other Authors: DIVISION OF ENGINEERING AND TECH MGT
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Published: Springer Science and Business Media LLC 2022
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Online Access:https://scholarbank.nus.edu.sg/handle/10635/234474
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spelling sg-nus-scholar.10635-2344742024-11-15T19:10:57Z REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats Dolzhenko, E Weisburd, B Ibañez, K Rajan-Babu, IS Anyansi, C Bennett, MF Billingsley, K Carroll, A Clamons, S Danzi, MC Deshpande, V Ding, J Fazal, S Halman, A Jadhav, B Qiu, Y Richmond, PA Saunders, CT Scheffler, K van Vugt, JJFA Zwamborn, RRAJ Chong, SS Friedman, JM Tucci, A Rehm, HL Eberle, MA DIVISION OF ENGINEERING AND TECH MGT PAEDIATRICS Assoc Prof Samuel Chong Repeat expansions Short tandem repeats Short-read sequencing data Visualization Alleles Amyotrophic Lateral Sclerosis Exome Fragile X Mental Retardation Protein Haplotypes High-Throughput Nucleotide Sequencing Humans Tandem Repeat Sequences 10.1186/s13073-022-01085-z Genome Medicine 14 1 84- 2022-11-14T06:39:58Z 2022-11-14T06:39:58Z 2022-12-01 2022-11-14T00:55:18Z Article Dolzhenko, E, Weisburd, B, Ibañez, K, Rajan-Babu, IS, Anyansi, C, Bennett, MF, Billingsley, K, Carroll, A, Clamons, S, Danzi, MC, Deshpande, V, Ding, J, Fazal, S, Halman, A, Jadhav, B, Qiu, Y, Richmond, PA, Saunders, CT, Scheffler, K, van Vugt, JJFA, Zwamborn, RRAJ, Chong, SS, Friedman, JM, Tucci, A, Rehm, HL, Eberle, MA (2022-12-01). REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats. Genome Medicine 14 (1) : 84-. ScholarBank@NUS Repository. https://doi.org/10.1186/s13073-022-01085-z 1756-994X https://scholarbank.nus.edu.sg/handle/10635/234474 Springer Science and Business Media LLC Elements
institution National University of Singapore
building NUS Library
continent Asia
country Singapore
Singapore
content_provider NUS Library
collection ScholarBank@NUS
topic Repeat expansions
Short tandem repeats
Short-read sequencing data
Visualization
Alleles
Amyotrophic Lateral Sclerosis
Exome
Fragile X Mental Retardation Protein
Haplotypes
High-Throughput Nucleotide Sequencing
Humans
Tandem Repeat Sequences
spellingShingle Repeat expansions
Short tandem repeats
Short-read sequencing data
Visualization
Alleles
Amyotrophic Lateral Sclerosis
Exome
Fragile X Mental Retardation Protein
Haplotypes
High-Throughput Nucleotide Sequencing
Humans
Tandem Repeat Sequences
Dolzhenko, E
Weisburd, B
Ibañez, K
Rajan-Babu, IS
Anyansi, C
Bennett, MF
Billingsley, K
Carroll, A
Clamons, S
Danzi, MC
Deshpande, V
Ding, J
Fazal, S
Halman, A
Jadhav, B
Qiu, Y
Richmond, PA
Saunders, CT
Scheffler, K
van Vugt, JJFA
Zwamborn, RRAJ
Chong, SS
Friedman, JM
Tucci, A
Rehm, HL
Eberle, MA
REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats
description 10.1186/s13073-022-01085-z
author2 DIVISION OF ENGINEERING AND TECH MGT
author_facet DIVISION OF ENGINEERING AND TECH MGT
Dolzhenko, E
Weisburd, B
Ibañez, K
Rajan-Babu, IS
Anyansi, C
Bennett, MF
Billingsley, K
Carroll, A
Clamons, S
Danzi, MC
Deshpande, V
Ding, J
Fazal, S
Halman, A
Jadhav, B
Qiu, Y
Richmond, PA
Saunders, CT
Scheffler, K
van Vugt, JJFA
Zwamborn, RRAJ
Chong, SS
Friedman, JM
Tucci, A
Rehm, HL
Eberle, MA
format Article
author Dolzhenko, E
Weisburd, B
Ibañez, K
Rajan-Babu, IS
Anyansi, C
Bennett, MF
Billingsley, K
Carroll, A
Clamons, S
Danzi, MC
Deshpande, V
Ding, J
Fazal, S
Halman, A
Jadhav, B
Qiu, Y
Richmond, PA
Saunders, CT
Scheffler, K
van Vugt, JJFA
Zwamborn, RRAJ
Chong, SS
Friedman, JM
Tucci, A
Rehm, HL
Eberle, MA
author_sort Dolzhenko, E
title REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats
title_short REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats
title_full REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats
title_fullStr REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats
title_full_unstemmed REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats
title_sort reviewer: haplotype-resolved visualization of read alignments in and around tandem repeats
publisher Springer Science and Business Media LLC
publishDate 2022
url https://scholarbank.nus.edu.sg/handle/10635/234474
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