Using indirect protein-protein interactions for protein complex prediction

Using indirect protein-protein interactions for protein complex prediction

10.1142/S0219720008003497

Saved in:

Bibliographic Details
Main Authors:	Chua, H.N., Ning, K., Sung, W.-K., Leong, H.W., Wong, L.
Other Authors:	COMPUTER SCIENCE
Format:	Conference or Workshop Item
Published:	2013
Subjects:	Level-2 interaction Partial clique merging Protein - Protein interaction Protein complex prediction
Online Access:	http://scholarbank.nus.edu.sg/handle/10635/40060
Tags:	Add Tag No Tags, Be the first to tag this record!
Institution:	National University of Singapore

Similar Items

A survey of computational methods for protein complex prediction from protein interaction networks
by: Srihari, S., et al.
Published: (2013)

Employing functional interactions for characterisation and detection of sparse complexes from yeast PPI networks
by: Srihari, S., et al.
Published: (2013)

Integrating biological insights with topological characteristics for improved complex prediction from protein interaction networks
by: SRIGANESH MANIGANAHALLI SRIHARI
Published: (2012)

Computational Methods for Identifying Conserved Protein Complexes between Species from Protein Interaction Data
by: NGUYEN PHI VU
Published: (2013)

Effect of training datasets on support vector machine prediction of protein-protein interactions
by: Lo, S.L., et al.
Published: (2014)

Discovering interacting domains and motifs in protein-protein interactions
by: Hugo, W., et al.
Published: (2013)

Probabilistic prediction of protein-protein interactions from the protein sequences
by: Chinnasamy, A., et al.
Published: (2013)

Protein-protein interactions prediction via multimodal deep polynomial network and regularized extreme learning machine
by: Lei, Haijun, et al.
Published: (2020)

Computational detection of protein complexes in AP-MS experiments
by: Choi, H.
Published: (2014)

Protein function prediction via protein-protein interaction - a Support Vector Machine approach
by: LO SIAW LING
Published: (2010)

Detecting temporal protein complexes from dynamic protein-protein interaction networks
by: Ou-Yang, L, et al.
Published: (2020)

Effect of training datasets on support vector machine prediction of protein-protein interactions
by: LO, Siaw Ling, et al.
Published: (2005)

D-SLIMMER: Domain-SLiM interaction motifs miner for sequence based protein-protein interaction data
by: Hugo, W., et al.
Published: (2013)

Clustering-based approach for predicting motif pairs from protein interaction data
by: Leung, H.C.-M., et al.
Published: (2013)

PPiClust: Effect clustering of 3D protein-protein interaction interfaces
by: Aung, Z., et al.
Published: (2013)

A probabilistic graph-theoretic approach to integrate multiple predictions for the protein-protein subnetwork prediction challenge
by: Chua, H.N., et al.
Published: (2013)

Physical and functional interaction of dengue and host protein
by: Teera Poyomtip
Published: (2023)

Discovering Dynamic Protein Complexes from Static Interacomes: Three Challenges
by: YONG CHERN HAN
Published: (2015)

Benchmarking Human Protein Complexes to Investigate Drug-Related Systems and Evaluate Predicted Protein Complexes
by: Wu M., et al.
Published: (2019)

Machine learning on protein-protein interaction prediction: models, challenges and trends
by: Tang, Tao, et al.
Published: (2023)

A core-attachment based method to detect protein complexes in PPI networks
by: Wu, M, et al.
Published: (2020)

Protein-protein interaction: A supervised learning approach
by: XIAO JUAN
Published: (2010)

NeMoFinder: Dissecting genome-wide protein-protein interactions with meso-scale network motifs
by: Chen, J., et al.
Published: (2013)

Linkers in the structural biology of protein-protein interactions
by: Reddy Chichili, V.P., et al.
Published: (2014)

Advances in exploration of machine learning methods for predicting functional class and interaction profiles of proteins and peptides irrespective of sequence homology
by: Cui, J., et al.
Published: (2014)

PREDICTIVE MODELS TO DISCOVER NOVEL RNA-BINDING PROTEINS
by: JIN WENHAO
Published: (2018)

NAUTICA: classifying transcription factor interactions by positional and protein-protein interaction information
by: Perna, S., et al.
Published: (2021)

Feature generation and representations for protein-protein interaction classification
by: Lan, M., et al.
Published: (2013)

Efficient development of stable and highly functionalised peptides targeting the CK2α/CK2β protein–protein interaction
by: Iegre, Jessica, et al.
Published: (2019)

In silico study on the protein-protein interaction of D-dimer and glycoprotein VI in blood plasma as potential biomarker of ischemic stroke
by: de Ramos, Brenna R., et al.
Published: (2022)

Probing protein dynamics and protein-protein interaction by NMR spectroscopy
by: SUI XIAOGANG
Published: (2010)

PROTEIN COMPLEX PREDICTION BY DATE HUB REMOVAL
by: IANA PYROGOVA
Published: (2017)

Molecular docking studies on the interaction of the Cryptosporidium parvum protein, CpCDPK1, with selected plant compounds
by: Quijano, Rupert C., Jr., et al.
Published: (2024)

Amino-acid residue association models for large scale protein-protein interaction prediction
by: Rao, R., et al.
Published: (2014)

SAINT-MS1: Protein-protein interaction scoring using label-free intensity data in affinity purification-mass spectrometry experiments
by: Choi, H., et al.
Published: (2014)

Cell-based Profiling of Lipid-Protein Interactions
by: PHUA ZHENG YEN
Published: (2019)

Evaluating proteins release from, and their interactions with, thermosensitive poly (N-isopropylacrylamide) hydrogels
by: Wu, J.-Y., et al.
Published: (2014)

Mapping protein-protein interfaces on the basis of proton density difference
by: Sui, X., et al.
Published: (2014)

The nonstructural protein 8 (nsp8) of the SARS coronavirus interacts with its ORF6 accessory protein
by: Kumar, P., et al.
Published: (2014)

MICROARRAY-ASSISTED DISCOVERY OF PROTEIN-PROTEIN INTERACTION INHIBITORS AND ENZYME PROBES
by: NA ZHENKUN
Published: (2014)