High resolution DNA melting analysis: An application for prenatal control of α-thalassemia
Objective: To report the use of real-time gap-PCR using SYTO9 with high-resolution melting analysis (HRMA) in prenatal diagnosis of α-thalassemia 1. Materials and methods: Real-time gap-PCR using SYTO9 with HRMA was performed in 33 DNA samples from chorionic villi sampling (8 normal, 16 heterozygous...
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th-cmuir.6653943832-36722014-08-30T02:35:11Z High resolution DNA melting analysis: An application for prenatal control of α-thalassemia Sirichotiyakul S. Wanapirak C. Saetung R. Sanguansermsri T. Objective: To report the use of real-time gap-PCR using SYTO9 with high-resolution melting analysis (HRMA) in prenatal diagnosis of α-thalassemia 1. Materials and methods: Real-time gap-PCR using SYTO9 with HRMA was performed in 33 DNA samples from chorionic villi sampling (8 normal, 16 heterozygous, and 9 homozygous) to determine the α-thalassemia 1 gene [normal and Southeast Asia (-SEA) allele]. Result: The dissociation curve analysis in normal and -SEA allele gave a peak of Tm at 91.80 ± 0.14 °C and 88.67 ± 0.08 °C, respectively. Normal genotype and homozygous α-thalassemia 1 showed a single peak of Tm that corresponded to their alleles. The heterozygotes gave both peaks with higher normal peak and smaller -SEA peak. Thirty one samples showed consistent results with the conventional gap-PCR. Two samples with ambiguous results were confirmed to be maternal DNA contamination on real-time quantitative PCR and microsatellite assay. HRMA from both samples showed similar pattern to that of heterozygotes. However, they showed much smaller normal peak compared with the -SEA peak, which is in contrast to those of heterozygotes and can readily be distinguished. Conclusion: HRMA with SYTO9 is feasible for prenatal diagnosis of α-thalassemia. It had potential advantage of prompt detection maternal DNA contamination. Copyright © 2010 John Wiley & Sons, Ltd. 2014-08-30T02:35:11Z 2014-08-30T02:35:11Z 2010 Article 1973851 10.1002/pd.2480 20225225 PRDID http://www.scopus.com/inward/record.url?eid=2-s2.0-77950674462&partnerID=40&md5=a34d3bd5654255586c89da2835e2a1a1 http://cmuir.cmu.ac.th/handle/6653943832/3672 English |
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Objective: To report the use of real-time gap-PCR using SYTO9 with high-resolution melting analysis (HRMA) in prenatal diagnosis of α-thalassemia 1. Materials and methods: Real-time gap-PCR using SYTO9 with HRMA was performed in 33 DNA samples from chorionic villi sampling (8 normal, 16 heterozygous, and 9 homozygous) to determine the α-thalassemia 1 gene [normal and Southeast Asia (-SEA) allele]. Result: The dissociation curve analysis in normal and -SEA allele gave a peak of Tm at 91.80 ± 0.14 °C and 88.67 ± 0.08 °C, respectively. Normal genotype and homozygous α-thalassemia 1 showed a single peak of Tm that corresponded to their alleles. The heterozygotes gave both peaks with higher normal peak and smaller -SEA peak. Thirty one samples showed consistent results with the conventional gap-PCR. Two samples with ambiguous results were confirmed to be maternal DNA contamination on real-time quantitative PCR and microsatellite assay. HRMA from both samples showed similar pattern to that of heterozygotes. However, they showed much smaller normal peak compared with the -SEA peak, which is in contrast to those of heterozygotes and can readily be distinguished. Conclusion: HRMA with SYTO9 is feasible for prenatal diagnosis of α-thalassemia. It had potential advantage of prompt detection maternal DNA contamination. Copyright © 2010 John Wiley & Sons, Ltd. |
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Article |
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Sirichotiyakul S. Wanapirak C. Saetung R. Sanguansermsri T. |
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Sirichotiyakul S. Wanapirak C. Saetung R. Sanguansermsri T. High resolution DNA melting analysis: An application for prenatal control of α-thalassemia |
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Sirichotiyakul S. Wanapirak C. Saetung R. Sanguansermsri T. |
author_sort |
Sirichotiyakul S. |
title |
High resolution DNA melting analysis: An application for prenatal control of α-thalassemia |
title_short |
High resolution DNA melting analysis: An application for prenatal control of α-thalassemia |
title_full |
High resolution DNA melting analysis: An application for prenatal control of α-thalassemia |
title_fullStr |
High resolution DNA melting analysis: An application for prenatal control of α-thalassemia |
title_full_unstemmed |
High resolution DNA melting analysis: An application for prenatal control of α-thalassemia |
title_sort |
high resolution dna melting analysis: an application for prenatal control of α-thalassemia |
publishDate |
2014 |
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http://www.scopus.com/inward/record.url?eid=2-s2.0-77950674462&partnerID=40&md5=a34d3bd5654255586c89da2835e2a1a1 http://cmuir.cmu.ac.th/handle/6653943832/3672 |
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