Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR

© 2020 Elsevier B.V. Carbapenemase Inactivation Method (CIM) is a test to detect presence of the carbapenemase in Gram-negative bacteria. Determination of the carbapenemase production by inactivation of meropenem requires that a zone of control E. coli inhibition be measured approximately 6–24 h aft...

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Main Authors: F. Haque, S. Fisseha, P. Athamanolap, R. Tower, J. Ortega, C. Dominguez, T. Maruca, D. Torpey, R. Myers, P. Laksanalamai
Other Authors: Mahidol University
Format: Article
Published: 2020
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Online Access:https://repository.li.mahidol.ac.th/handle/123456789/59857
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spelling th-mahidol.598572020-11-18T16:55:26Z Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR F. Haque S. Fisseha P. Athamanolap R. Tower J. Ortega C. Dominguez T. Maruca D. Torpey R. Myers P. Laksanalamai Mahidol University Laboratories Administration Biochemistry, Genetics and Molecular Biology Immunology and Microbiology Medicine © 2020 Elsevier B.V. Carbapenemase Inactivation Method (CIM) is a test to detect presence of the carbapenemase in Gram-negative bacteria. Determination of the carbapenemase production by inactivation of meropenem requires that a zone of control E. coli inhibition be measured approximately 6–24 h after plating. We have modified the CIM test by developing a rapid method which instead measures the growth of E. coli indicator strain ATCC 25922 using real-time PCR, referred to as a nucleic acid testing CIM (natCIM). Our natCIM, therefore reduces the detecting time from 6 to 24 h to approximately 4 h. 2020-11-18T08:00:08Z 2020-11-18T08:00:08Z 2020-11-01 Article Journal of Microbiological Methods. Vol.178, (2020) 10.1016/j.mimet.2020.106072 18728359 01677012 2-s2.0-85092451474 https://repository.li.mahidol.ac.th/handle/123456789/59857 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85092451474&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Biochemistry, Genetics and Molecular Biology
Immunology and Microbiology
Medicine
spellingShingle Biochemistry, Genetics and Molecular Biology
Immunology and Microbiology
Medicine
F. Haque
S. Fisseha
P. Athamanolap
R. Tower
J. Ortega
C. Dominguez
T. Maruca
D. Torpey
R. Myers
P. Laksanalamai
Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR
description © 2020 Elsevier B.V. Carbapenemase Inactivation Method (CIM) is a test to detect presence of the carbapenemase in Gram-negative bacteria. Determination of the carbapenemase production by inactivation of meropenem requires that a zone of control E. coli inhibition be measured approximately 6–24 h after plating. We have modified the CIM test by developing a rapid method which instead measures the growth of E. coli indicator strain ATCC 25922 using real-time PCR, referred to as a nucleic acid testing CIM (natCIM). Our natCIM, therefore reduces the detecting time from 6 to 24 h to approximately 4 h.
author2 Mahidol University
author_facet Mahidol University
F. Haque
S. Fisseha
P. Athamanolap
R. Tower
J. Ortega
C. Dominguez
T. Maruca
D. Torpey
R. Myers
P. Laksanalamai
format Article
author F. Haque
S. Fisseha
P. Athamanolap
R. Tower
J. Ortega
C. Dominguez
T. Maruca
D. Torpey
R. Myers
P. Laksanalamai
author_sort F. Haque
title Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR
title_short Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR
title_full Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR
title_fullStr Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR
title_full_unstemmed Reduction of the Carbapenemase Inactivation Method (CIM) assay time by real-time PCR
title_sort reduction of the carbapenemase inactivation method (cim) assay time by real-time pcr
publishDate 2020
url https://repository.li.mahidol.ac.th/handle/123456789/59857
_version_ 1763492367251275776