PET-tool: A software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data

by Chiu, K.P., Wong, C.-H., Chen, Q., Ariyaratne, P., Ooi, H.S., Wei, C.-L., Sung, W.-K.K., Ruan, Y.
Published 2013

Pathway aberrations of murine melanoma cells observed in Paired-End diTag transcriptomes

by Chiu, K.P., Ariyaratne, P., Xu, H., Tan, A., Ng, P., Liu, E.T.-B., Ruan, Y., Wei, C.-L., Sung, W.-K.K.
Published 2013

De-Novo Identification of PPARγ/RXR Binding Sites and Direct Targets during Adipogenesis

by Hamza M.S., Pott S., Vega V.B., Thomsen J.S., Kandhadayar G.S., Ng P.W.P., Chiu K.P., Pettersson S., Wei C.L., Ruan Y., Liu E.T.
Published 2018

Whole-Genome Mapping of Histone H3 Lys4 and 27 Trimethylations Reveals Distinct Genomic Compartments in Human Embryonic Stem Cells

by Zhao, X.D., Han, X., Chew, J.L., Liu, J., Chiu, K.P., Choo, A., Orlov, Y.L., Sung, W.-K., Shahab, A., Kuznetsov, V.A., Bourque, G., Oh, S., Ruan, Y., Ng, H.-H., Wei, C.-L.
Published 2013

Genome-wide Mapping of RELA(p65) Binding Identifies E2F1 as a Transcriptional Activator Recruited by NF-κB upon TLR4 Activation

by Lim, C.-A., Yao, F., Wong, J.J.-Y., George, J., Xu, H., Chiu, K.P., Sung, W.-K., Lipovich, L., Vega, V.B., Chen, J., Shahab, A., Zhao, X.D., Hibberd, M., Wei, C.-L., Lim, B., Ng, H.-H., Ruan, Y., Chin, K.-C.
Published 2014

Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection

by Ruan, Y., Wei, C.L., Ee, L.A., Vega, V.B., Thoreau, H., Yun, S.T.S., Chia, J.-M., Ng, P., Chiu, K.P., Lim, L., Tao, Z., Peng, C.K., Ean, L.O.L., Lee, N.M., Sin, L.Y., Ng, L.F.P., Ren, E.C., Stanton, Lawrence Walter, Long, P.M., Liu, E.T.
Published 2014

A global map of p53 transcription-factor binding sites in the human genome

by Wei, C.-L., Wu, Q., Vega, V.B., Chiu, K.P., Ng, P., Zhang, T., Shahab, A., Yong, H.C., Fu, Y., Weng, Z., Liu, J., Zhao, X.D., Chew, J.-L., Lee, Y.L., Kuznetsov, V.A., Sung, W.-K., Miller, L.D., Lim, B., Liu, E.T., Yu, Q., Ng, H.-H., Ruan, Y.
Published 2014

The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells

by Loh, Y.-H., Wu, Q., Chew, J.-L., Vega, V.B., Zhang, W., Chen, X., Bourque, G., George, J., Leong, B., Liu, J., Wong, K.-Y., Sung, K.W., Lee, C.W.H., Zhao, X.-D., Chiu, K.-P., Lipovich, L., Kuznetsov, V.A., Robson, P., Stanton, L.W., Wei, C.-L., Ruan, Y., Lim, B., Ng, H.-H.
Published 2014