ChIP-based methods for the identification of long-range chromatin interactions

by Fullwood, M.J., Ruan, Y.
Published 2014

Chromatin interaction networks and higher order architectures of eukaryotic genomes

by Singh Sandhu, K., Li, G., Sung, W.-K., Ruan, Y.
Published 2013

Interrogating the transcriptome

by Ruan, Y., Le Ber, P., Hui Ng, H., Liu, E.T.
Published 2014

Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses

by Fullwood, M.J., Wei, C.-L., Liu, E.T., Ruan, Y.
Published 2014

The role of government in an emerging disruptive innovation: The case of E-bike in China

by Ruan, Y., Hang, C.C., Wang, Y.M., Ma, R.F.
Published 2014

Is knowledge retained by healthcare providers after training? A pragmatic evaluation of drug-resistant tuberculosis management in China

by Wu, S., Li, R., Su, W., Ruan, Y., Chen, M., Khan, M.S.
Published 2021

Social Dynamics of Paranoia and Distrust in Teams

by McAllister, Daniel J., PANG, K., TAN, Hwee Hoon, RUAN, Y.
Published 2006

Differentially expressed circulating LncRNAs and mRNA identified by microarray analysis in obese patients

by Sun, J, Ruan, Y, Wang, M, Chen, R, Yu, N, Sun, L, Liu, T, Chen, H
Published 2020

BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation

by Lim, J.-Q., Tennakoon, C., Li, G., Wong, E., Ruan, Y., Wei, C.-L., Sung, W.-K.
Published 2014

Targeted inactivation and identification of targets of the Gli2a transcription factor in the zebrafish

by Wang X., Zhao Z., Muller J., Iyu A., Khng A.J., Guccione E., Ruan Y., Ingham P.W.
Published 2020

Chromatin interaction analysis with Paired-End Tag Sequencing (ChIA-PET) for mapping chromatin Interactions and Understanding Transcription Regulation

by Goh, Y., Fullwood, M.J., Poh, H.M., Peh, S.Q., Ong, C.T., Zhang, J., Ruan, X., Ruan, Y.
Published 2014

PET-tool: A software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data

by Chiu, K.P., Wong, C.-H., Chen, Q., Ariyaratne, P., Ooi, H.S., Wei, C.-L., Sung, W.-K.K., Ruan, Y.
Published 2013

Genome-wide analysis reveals methyl-CpG-binding protein 2-dependent regulation of microRNAs in a mouse model of Rett syndrome

by Wu, H., Tao, J., Chen, P.J., Shahab, A., Ge, W., Hart, R.P., Ruan, X., Ruan, Y., Sun, Y.E.
Published 2014

Effect of excimer laser annealing on the silicon nanocrystals embedded in silicon-rich silicon nitride film

by Chen, Rui, Qi, D. F., Ruan, Y. J., Pan, S. W., Chen, S. Y., Xie, Sheng, Li, Cheng, Lai, H. K., Sun, H. D.
Published 2013

Pathway aberrations of murine melanoma cells observed in Paired-End diTag transcriptomes

by Chiu, K.P., Ariyaratne, P., Xu, H., Tan, A., Ng, P., Liu, E.T.-B., Ruan, Y., Wei, C.-L., Sung, W.-K.K.
Published 2013

SARS transmission pattern in Singapore reassessed by viral sequence variation analysis

by Liu J., Lim S.L., Ruan Y., Ling A.E., Ng L.F.P., Drosten C., Liu E.T., Stanton L.W., Hibberd M.L.
Published 2018

De-Novo Identification of PPARγ/RXR Binding Sites and Direct Targets during Adipogenesis

by Hamza M.S., Pott S., Vega V.B., Thomsen J.S., Kandhadayar G.S., Ng P.W.P., Chiu K.P., Pettersson S., Wei C.L., Ruan Y., Liu E.T.
Published 2018

RNA viral community in human feces: Prevalence of plant pathogenic viruses

by Zhang T., Breitbart M., Lee W.H., Run J.-Q., Wei C.L., Soh S.W.L., Hibberd M.L., Liu E.T., Rohwer F., Ruan Y.
Published 2019

Hepatotoxicity in a 52-week randomized trial of short-term versus long-term treatment with buprenorphine/naloxone in HIV-negative injection opioid users in China and Thailand

by Lucas G., Young A., Donnell D., Richardson P., Aramrattana A., Shao Y., Ruan Y., Liu W., Fu L., Ma J., Celentano D., Metzger D., Jackson J., Burns D.
Published 2015

Xenopus tropicalis genome re-scaffolding and re-annotation reach the resolution required for in vivo ChIA-PET analysis

by Buisine N., Ruan X., Bilesimo P., Grimaldi A., Alfama G., Ariyaratne P., Mulawadi F., Chen J., Sung W.-K., Liu E.T., Demeneix B.A., Ruan Y., Sachs L.M.
Published 2018