Deep sequencing in infectious diseases: Immune and pathogen repertoires for the improvement of patient outcomes

by Burkholder, W.F, Newell, E.W, Poidinger, M, Chen, S, Fink, K
Published 2020

Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline

by Chen H., Lau M.C., Wong M.T., Newell E.W., Poidinger M., Chen J.
Published 2019

Regulation of hERG and hEAG channels by Src and by SHP-1 tyrosine phosphatase via an ITIM region in the cyclic nucleotide binding domain

by Schlichter L.C., Jiang J., Wang J., Newell E.W., Tsui F.W.L., Lam D.
Published 2020

Characterization of Influenza Vaccine Immunogenicity Using Influenza Antigen Microarrays

by Price J.V., Jarrell J.A., Furman D., Kattah N.H., Newell E., Dekker C.L., Davis M.M., Utz P.J.
Published 2020

OpenCyto: An Open Source Infrastructure for Scalable, Robust, Reproducible, and Automated, End-to-End Flow Cytometry Data Analysis

by Finak G., Frelinger J., Jiang W., Newell E.W., Ramey J., Davis M.M., Kalams S.A., De Rosa S.C., Gottardo R.
Published 2020

Erratum to: Checkpoint blockade immunotherapy reshapes the high-dimensional phenotypic heterogeneity of murine intratumoural neoantigen-specific CD8+ T cells (Nature Communications...

by Fehlings, M, Simoni, Y, Penny, H.L, Becht, E, Loh, C.Y, Gubin, M.M, Ward, J.P, Wong, S.C, Schreiber, R.D, Newell, E.W
Published 2020

Adaptive NKG2C+CD57+ natural killer cell and Tim-3 expression during viral infections

by Kared, H., Martelli, S., Tan, S.W., Simoni, Y., Chong, M.L., Yap, S.H., Newell, E.W., Pender, S.L.F., Kamarulzaman, A., Rajasuriar, R., Larbi, A.
Published 2020

Checkpoint blockade immunotherapy reshapes the high-dimensional phenotypic heterogeneity of murine intratumoural neoantigen-specific CD8+ T cells

by Fehlings, M, Simoni, Y, Penny, H.L, Becht, E, Loh, C.Y, Gubin, M.M, Ward, J.P, Wong, S.C, Schreiber, R.D, Newell, E.W
Published 2020

Characterization of a candidate tetravalent vaccine based on 2’-O-methyltransferase mutants

by Züst R., Li S.-H., Xie X., Velumani S., Chng M., Toh Y.-X., Zou J., Dong H., Shan C., Pang J., Qin C.-F., Newell E.W., Shi P.-Y., Fink K.
Published 2019

Parallel T-cell cloning and deep sequencing of human MAIT cells reveal stable oligoclonal TCRβ 2 repertoire

by Lepore, M., Kalinicenko, A., Colone, A., Paleja, B., Singhal, A., Tschumi, A., Lee, B., Poidinger, M., Zolezzi, F., Quagliata, L., Sander, P., Newell, E., Bertoletti, A., Terracciano, L., De Libero, G., Mori, L.
Published 2016

Author Correction: Lung endothelial cell antigen cross-presentation to CD8+T cells drives malaria-associated lung injury (Nature Communications, (2019), 10, 1, (4241), 10.1038/s414...

by Claser, C., Nguee, S.Y.T., Balachander, A., Howland, S.W., Becht, E., Gunasegaran, B., Hartimath, S.V., Lee, A.W.Q., Ho, J.T.T., Ong, C.B., Newell, E.W., Goggi, J., Ng, L.G., Renia, L.
Published 2022

Lung endothelial cell antigen cross-presentation to CD8+T cells drives malaria-associated lung injury

by Claser, C., Nguee, S.Y.T., Balachander, A., Wu Howland, S., Becht, E., Gunasegaran, B., Hartimath, S.V., Lee, A.W.Q., Theng Theng Ho, J., Bing Ong, C., Newell, E.W., Goggi, J., Guan Ng, L., Renia, L.
Published 2021

Clonal deletion prunes but does not eliminate self-specific ?? CD8+ T lymphocytes

by Yu, W., Jiang, N., Ebert, P.J.R., Kidd, B.A., Muller, S., Lund, P.J., Juang, J., Adachi, K., Tse, T., Birnbaum, M.E., Newell, E.W., Wilson, D.M., Grotenbreg, G.M., Valitutti, S., Quake, S.R., Davis, M.M.
Published 2016

Mutating chikungunya virus non-structural protein produces potent live-attenuated vaccine candidate

by Chan, Y.-H., Teo, T.-H., Utt, A., Tan, J.J.L., Amrun, S.N., Abu Bakar, F., Yee, W.-X., Becht, E., Lee, C.Y.-P., Lee, B., Rajarethinam, R., Newell, E., Merits, A., Carissimo, G., Lum, F.-M., Ng, L.F.P.
Published 2021

Metformin enhances anti-mycobacterial responses by educating CD8+ T-cell immunometabolic circuits

by Böhme, J., Martinez, N., Li, S., Lee, A., Marzuki, M., Tizazu, A.M., Ackart, D., Frenkel, J.H., Todd, A., Lachmandas, E., Lum, J., Shihui, F., Ng, T.P., Lee, B., Larbi, A., Netea, M.G., Basaraba, R., van Crevel, R., Newell, E., Kornfeld, H., Singhal, A.
Published 2021

Liver fibrosis and CD206⁺ macrophage accumulation are suppressed by anti-GM-CSF therapy

by Tan-Garcia, A, Lai, F, Sheng Yeong, JP, Irac, SE, Ng, PY, Msallam, R, Tatt Lim, JC, Wai, LE, Tham, CYL, Choo, SP, Lim, T, Young, DY, D'Ambrosio, R, Degasperi, E, Perbellini, R, Newell, E, Le Bert, N, Ginhoux, F, Bertoletti, A, Chen, Q, Dutertre, CA
Published 2022

Human Tumor-Infiltrating MAIT Cells Display Hallmarks of Bacterial Antigen Recognition in Colorectal Cancer

by Li, S., Simoni, Y., Becht, E., Loh, C.Y., Li, N., Lachance, D., Koo, S.-L., Lim, T.P., Tan, E.K.W., Mathew, R., Nguyen, A., Golovato, J., Berkson, J.D., Prlic, M., Lee, B., Minot, S.S., Nagarajan, N., Dey, N., Tan, D.S.W., Tan, I.B., Newell, E.W.
Published 2021

Mapping of γ/δ T cells reveals Vδ2+ T cells resistance to senescence

by Xu, W., Monaco, G., Wong, E.H., Tan, W.L.W., Kared, H., Simoni, Y., Tan, S.W., How, W.Z.Y., Tan, C.T.Y., Lee, B.T.K., Carbajo, D., Srinivasan, K.G., Low, I.C.H., Mok, E.W.H., Foo, S., Lum, J., Tey, H.L., Tan, W.P., Poidinger, M., Newell, E., Ng, T.P., Foo, R., Akbar, A.N., Fülöp, T., Larbi, A.
Published 2022

Human fetal dendritic cells promote prenatal T-cell immune suppression through arginase-2

by McGovern N., Shin A., Low G., Low D., Duan K., Yao L.J., Msallam R., Low I., Shadan N.B., Sumatoh H.R., Soon E., Lum J., Mok E., Hubert S., See P., Kunxiang E.H., Lee Y.H., Janela B., Choolani M., Mattar C.N.Z., Fan Y., Lim T.K.H., Chan D.K.H., Tan K.-K., Tam J.K.C., Schuster C., Elbe-B�rger A., Wang X.-N., Bigley V., Collin M., Haniffa M., Schlitzer A., Poidinger M., Albani S., Larbi A., Newell E.W., Chan J.K.Y., Ginhoux F.
Published 2018