An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias

Lewy body dementias are the second most common cause of neurodegenerative dementia in the elderly after Alzheimer’s disease (AD). The two clinical subgroups of Lewy body dementias, namely, dementia with Lewy bodies (DLB) and Parkinson’s disease dementia (PDD), are differentiated by the chronology of...

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Main Authors: Datta, Arnab, Chai, Yuek Ling, Tan, Jing Min, Lee, Jasinda H., Francis, Paul T., Chen, Christopher P., Sze, Siu Kwan, Lai, Mitchell K. P.
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2018
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Online Access:https://hdl.handle.net/10356/88540
http://hdl.handle.net/10220/45822
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spelling sg-ntu-dr.10356-885402023-02-28T17:02:37Z An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias Datta, Arnab Chai, Yuek Ling Tan, Jing Min Lee, Jasinda H. Francis, Paul T. Chen, Christopher P. Sze, Siu Kwan Lai, Mitchell K. P. School of Biological Sciences Dementia With Lewy Bodies Lewy Body Dementias DRNTU::Science::Biological sciences Lewy body dementias are the second most common cause of neurodegenerative dementia in the elderly after Alzheimer’s disease (AD). The two clinical subgroups of Lewy body dementias, namely, dementia with Lewy bodies (DLB) and Parkinson’s disease dementia (PDD), are differentiated by the chronology of cognitive symptoms relative to parkinsonism. At present, there remains a debate on whether DLB and PDD are separate disease entities, or fall within the same spectrum of Lewy body dementias. In this study, we compared the detergent-soluble proteome via an 8-plex isobaric tag for relative and absolute quantitation (iTRAQ) analysis of pooled lysates from the prefrontal cortex (BA9) of DLB (n = 19) and PDD (n = 21) patients matched a priori for amyloid (total Aβ42) burden, semi-quantitative scores for Lewy bodies and neurofibrillary tangles together with age-matched control (n = 21) subjects. A total of 1914 proteins were confidently identified by iTRAQ (false discovery rate = 0%). None of the proteins showed a significant yet opposite regulation in between DLB and PDD when compared to aged controls in the proteomic data set as well as following immunoblot analysis of the pooled and individual lysates involving all 61 subjects. The postsynaptic protein, synaptopodin (SYNPO) was significantly down-regulated in both DLB and PDD subgroups, suggesting a defective synaptic transmission in the demented patients. In conclusion, the largely similar proteome of DLB and PDD matched for amyloid burden suggests that variations in concomitant AD-related pathology, abnormal post-translational modifications or protein-protein interactions, defective intracellular trafficking or misfolding of proteins could play a part in driving the clinically observed differences between these two subgroups of Lewy body dementias. This further indicates that amyloid-targeting therapeutic strategies may show different efficacies in DLB versus PDD. NMRC (Natl Medical Research Council, S’pore) Published version 2018-09-05T03:24:07Z 2019-12-06T17:05:37Z 2018-09-05T03:24:07Z 2019-12-06T17:05:37Z 2017 Journal Article Datta, A., Chai, Y. L., Tan, J. M., Lee, J. H., Francis, P. T., Chen, C. P., . . . Lai, M. K. P. (2017). An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias. Molecular Brain, 10, 36-. doi:10.1186/s13041-017-0316-9 https://hdl.handle.net/10356/88540 http://hdl.handle.net/10220/45822 10.1186/s13041-017-0316-9 en Molecular Brain © 2017 The Author(s). This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. 13 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Dementia With Lewy Bodies
Lewy Body Dementias
DRNTU::Science::Biological sciences
spellingShingle Dementia With Lewy Bodies
Lewy Body Dementias
DRNTU::Science::Biological sciences
Datta, Arnab
Chai, Yuek Ling
Tan, Jing Min
Lee, Jasinda H.
Francis, Paul T.
Chen, Christopher P.
Sze, Siu Kwan
Lai, Mitchell K. P.
An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias
description Lewy body dementias are the second most common cause of neurodegenerative dementia in the elderly after Alzheimer’s disease (AD). The two clinical subgroups of Lewy body dementias, namely, dementia with Lewy bodies (DLB) and Parkinson’s disease dementia (PDD), are differentiated by the chronology of cognitive symptoms relative to parkinsonism. At present, there remains a debate on whether DLB and PDD are separate disease entities, or fall within the same spectrum of Lewy body dementias. In this study, we compared the detergent-soluble proteome via an 8-plex isobaric tag for relative and absolute quantitation (iTRAQ) analysis of pooled lysates from the prefrontal cortex (BA9) of DLB (n = 19) and PDD (n = 21) patients matched a priori for amyloid (total Aβ42) burden, semi-quantitative scores for Lewy bodies and neurofibrillary tangles together with age-matched control (n = 21) subjects. A total of 1914 proteins were confidently identified by iTRAQ (false discovery rate = 0%). None of the proteins showed a significant yet opposite regulation in between DLB and PDD when compared to aged controls in the proteomic data set as well as following immunoblot analysis of the pooled and individual lysates involving all 61 subjects. The postsynaptic protein, synaptopodin (SYNPO) was significantly down-regulated in both DLB and PDD subgroups, suggesting a defective synaptic transmission in the demented patients. In conclusion, the largely similar proteome of DLB and PDD matched for amyloid burden suggests that variations in concomitant AD-related pathology, abnormal post-translational modifications or protein-protein interactions, defective intracellular trafficking or misfolding of proteins could play a part in driving the clinically observed differences between these two subgroups of Lewy body dementias. This further indicates that amyloid-targeting therapeutic strategies may show different efficacies in DLB versus PDD.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Datta, Arnab
Chai, Yuek Ling
Tan, Jing Min
Lee, Jasinda H.
Francis, Paul T.
Chen, Christopher P.
Sze, Siu Kwan
Lai, Mitchell K. P.
format Article
author Datta, Arnab
Chai, Yuek Ling
Tan, Jing Min
Lee, Jasinda H.
Francis, Paul T.
Chen, Christopher P.
Sze, Siu Kwan
Lai, Mitchell K. P.
author_sort Datta, Arnab
title An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias
title_short An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias
title_full An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias
title_fullStr An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias
title_full_unstemmed An iTRAQ-based proteomic analysis reveals dysregulation of neocortical synaptopodin in Lewy body dementias
title_sort itraq-based proteomic analysis reveals dysregulation of neocortical synaptopodin in lewy body dementias
publishDate 2018
url https://hdl.handle.net/10356/88540
http://hdl.handle.net/10220/45822
_version_ 1759857479288619008