Deep sequencing of influenza A virus from a human challenge study reveals a selective bottleneck and only limited intrahost genetic diversification

by Leonard, A.S, McClain, M.T, Smith, G.J.D, Wentworth, D.E, Halpin, R.A, Lin, X, Ransier, A, Stockwell, T.B, Das, S.R, Gilbert, A.S, Lambkin-Williams, R, Ginsburg, G.S, Woods, C.W, Koelle, K
Published 2020

The effective rate of influenza reassortment is limited during human infection

by Sobel Leonard A., McClain M.T., Smith G.J.D., Wentworth D.E., Halpin R.A., Lin X., Ransier A., Stockwell T.B., Das S.R., Gilbert A.S., Lambkin-Williams R., Ginsburg G.S., Woods C.W., Koelle K., Illingworth C.J.R.
Published 2019

Influenza A virus evolution and spatio-temporal dynamics in eurasian wild birds: A phylogenetic and phylogeographical study of whole-genome sequence data

by Lewis, N.S, Verhagen, J.H, Javakhishvili, Z, Russell, C.A, Lexmond, P, Westgeest, K.B, Bestebroer, T.M, Halpin, R.A, Lin, X, Ransier, A, Fedorova, N.B, Stockwell, T.B, Latorre-Margalef, N, Olsen, B, Smith, G, Bahl, J, Wentworth, D.E, Waldenström, J, Fouchier, R.A.M, de Graaf, M
Published 2020