Variably improved microbial source tracking with digital droplet PCR

by Nshimyimana, Jean Pierre, Cruz, Mercedes Cecilia, Wuertz, Stefan, Thompson, Janelle R.
Published 2021

Next-generation sequencing (NGS) for assessment of microbial water quality : current progress, challenges, and future opportunities

by Tan, BoonFei, Ng, Charmaine, Nshimyimana, Jean Pierre, Loh, Lay Leng, Gin, Karina Y.-H., Thompson, Janelle R.
Published 2015

Palau's warmest reefs harbor thermally tolerant corals that thrive across different habitats

by Rivera, Hanny E., Cohen, Anne L., Thompson, Janelle R., Baums, Iliana B., Fox, Michael D., Meyer-Kaiser, Kirstin S.
Published 2023

Persistence of dengue (serotypes 2 and 3), Zika, yellow fever, and murine hepatitis virus RNA in untreated wastewater

by Chandra, Franciscus, Lee, Wei Lin, Armas, Federica, Leifels, Mats, Gu, Xiaoqiong, Chen, Hongjie, Wuertz, Stefan, Alm, Eric J., Thompson, Janelle
Published 2022

Contextualizing wastewater-based surveillance in the COVID-19 vaccination era

by Armas, Federica, Chandra, Franciscus, Lee, Wei Lin, Gu, Xiaoqiong, Chen, Hongjie, Xiao, Amy, Leifels, Mats, Wuertz, Stefan, Alm, Eric J., Thompson, Janelle
Published 2023

Geospatial distribution of viromes in tropical freshwater ecosystems

by Gu, Xiaoqiong, Tay, Qi Xiang Martin, Te, Shu Harn, Saeidi, Nazanin, Goh, Shin Giek, Kushmaro, Ariel, Thompson, Janelle R, Gin, Karina Yew-Hoong
Published 2022

Characterization of Metagenomes in Urban Aquatic Compartments Reveals High Prevalence of Clinically Relevant Antibiotic Resistance Genes in Wastewaters (vol 8, 2200, 2017)

by Ng, Charmaine, Tay, Martin, Tan, Boonfei, Le, Thai-Hoang, Haller, Laurence, Chen, Hongjie, Koh, Tse H, Barkham, Timothy MS, Thompson, Janelle R, Gin, Karina Y-H
Published 2023

Making waves : wastewater surveillance of SARS-CoV-2 for population-based health management

by Thompson, Janelle R., Nancharaiah, Yarlagadda V., Gu, Xiaoqiong, Lee, Wei Lin, Rajal, Verónica Beatriz, Haines, Monamie Bhadra, Girones, Rosina, Ng, Lee Ching, Alm, Eric J., Wuertz, Stefan
Published 2021

Making waves: wastewater surveillance of SARS-CoV-2 in an endemic future

by Wu, Fuqing, Lee, Wei Lin, Chen, Hongjie, Gu, Xiaoqiong, Chandra, Franciscus, Armas, Federica, Xiao, Amy, Leifels, Mats, Rhode, Steven F., Wuertz, Stefan, Thompson, Janelle, Alm, Eric J.
Published 2022

Monitoring human arboviral diseases through wastewater surveillance: challenges, progress and future opportunities

by Lee, Wei Lin, Gu, Xiaoqiong, Armas, Federica, Leifels, Mats, Wu, Fuqing, Chandra, Franciscus, Chua, Desmond Feng Jun, Syenina, Ayesa, Chen, Hongjie, Cheng, Dan, Ooi, Eng Eong, Wuertz, Stefan, Alm, Eric J., Thompson, Janelle
Published 2023

Development of an efficient wastewater testing protocol for high-throughput country-wide SARS-CoV-2 monitoring

by Mailepessov, Diyar, Arivalan, Sathish, Kong, Marcella, Griffiths, Jane, Low, Swee Ling, Chen, Hongjie, Hapuarachchi, Hapuarachchige Chanditha, Gu, Xiaoqiong, Lee, Wei Lin, Alm, Eric J., Thompson, Janelle, Wuertz, Stefan, Gin, Karina, Ng, Lee Ching, Wong, Judith Chui Ching
Published 2022

Longitudinal wastewater-based surveillance for SARS-CoV-2 in high-density student dormitories in Singapore

by Ng, Wei Jie, Kwok, Germaine, Hill, Eric, Chua, Desmond Feng Jun, Leifels, Mats, Kim, Se Yeon, Siti Aisyah Afri Affandi, Ramasamy, Shobana Gayathri, Nainani, Dhiraj, Cheng, Dan, Tay, Martin, Wong, Judith Chui Ching, Ng, Lee Ching, Wuertz, Stefan, Thompson, Janelle
Published 2024

Gut Ruminococcaceae levels at baseline correlate with risk of antibiotic-associated diarrhea

by Gu, Xiaoqiong, Sim, Jean X. Y., Lee, Wei Lin, Cui, Liang, Chan, Yvonne F. Z., Chang, Ega Danu, Teh, Yii Ean, Zhang, An-Ni, Armas, Federica, Chandra, Franciscus, Chen, Hongjie, Zhao, Shijie, Lee, Zhanyi, Thompson, Janelle, Ooi, Eng Eong, Low, Jenny G., Alm, Eric J., Kalimuddin, Shirin
Published 2023

Rapid displacement of SARS-CoV-2 variant Delta by Omicron revealed by allele-specific PCR in wastewater

by Lee, Wei Lin, Armas, Federica, Guarneri, Flavia, Gu, Xiaoqiong, Formenti, Nicoletta, Wu, Fuqing, Chandra, Franciscus, Parisio, Giovanni, Chen, Hongjie, Xiao, Amy, Romeo, Claudia, Scali, Federico, Tonni, Matteo, Leifels, Mats, Chua, Desmond Feng Jun, Kwok, Germaine W. C., Tay, Joey Y. R., Pasquali, Paolo, Thompson, Janelle, Alborali, Giovanni Loris, Alm, Eric J.
Published 2023

Co-incidence of BA.1 and BA.2 at the start of Singapore's Omicron wave revealed by community and university campus wastewater surveillance

by Chua, Desmond Feng Jun, Kim, Se Yeon, Hill, Eric, Cai, Jia Wei, Lee, Wei Lin, Gu, Xiaoqiong, Siti Aisyah Afri Affandi, Kwok, Germaine Wee Chiew, Ng, Weijie, Leifels, Mats, Armas, Federica, Chandra, Franciscus, Chen, Hongjie, Alma, Eric J., Tay, Martin, Wong, Judith Chui Ching, Ng, Lee Ching, Wuertz, Stefan, Thompson, Janelle Renee
Published 2023

Metrics to relate COVID-19 wastewater data to clinical testing dynamics

by Xiao, Amy, Wu, Fuqing, Bushman, Mary, Zhang, Jianbo, Imakaev, Maxim, Chai, Peter R., Duvallet, Claire, Endo, Noriko, Erickson, Timothy B., Armas, Federica, Arnold, Brian, Chen, Hongjie, Chandra, Franciscus, Ghaeli, Newsha, Gu, Xiaoqiong, Hanage, William P., Lee, Wei Lin, Matus, Mariana, McElroy, Kyle A., Moniz, Katya, Rhode, Steven F., Thompson, Janelle, Alm, Eric J.
Published 2022

Quantitative SARS-CoV-2 alpha variant B.1.1.7 tracking in wastewater by allele-specific RT-qPCR

by Lee, Wei Lin, Imakaev, Maxim, Armas, Federica, McElroy, Kyle A., Gu, Xiaoqiong, Duvallet, Claire, Chandra, Franciscus, Chen, Hongjie, Leifels, Mats, Mendola, Samuel, Floyd-O'Sullivan, Róisín, Powell, Morgan M., Wilson, Shane T., Berge, Karl L. J., Lim, Claire Y. J., Wu, Fuqing, Xiao, Amy, Moniz, Katya, Ghaeli, Newsha, Matus, Mariana, Thompson, Janelle R., Alm, Eric J.
Published 2022