Persistent homology analysis of ion aggregations and hydrogen-bonding networks

by Xia, Kelin
Published 2020

Sequence-based multiscale modeling for high-throughput chromosome conformation capture (Hi-C) data analysis

by Xia, Kelin
Published 2018

Multiscale virtual particle based elastic network model (MVP-ENM) for normal mode analysis of large-sized biomolecules

by Xia, Kelin
Published 2020

Ollivier persistent Ricci curvature-based machine learning for the protein-ligand binding affinity prediction

by Wee, Junjie, Xia, Kelin
Published 2022

Persistent spectral-based machine learning (PerSpect ML) for protein-ligand binding affinity prediction

by Meng, Zhenyu, Xia, Kelin
Published 2021

Persistent spectral based ensemble learning (PerSpect-EL) for protein-protein binding affinity prediction

by Wee, Junjie, Xia, Kelin
Published 2022

Forman persistent Ricci curvature (FPRC)-based machine learning models for protein-ligand binding affinity prediction

by Wee, Junjie, Xia, Kelin
Published 2023

Molecular nonlinear dynamics and protein thermal uncertainty quantification

by Xia, Kelin, Wei, Guo-Wei
Published 2016

Stochastic model for protein flexibility analysis

by Xia, Kelin, Wei, Guo-Wei
Published 2016

Multiscale persistent functions for biomolecular structure characterization

by Xia, Kelin, Li, Zhiming, Mu, Lin
Published 2020

Ligand binding induces agonistic-like conformational adaptations in helix 12 of progesterone receptor ligand binding domain

by Zheng, Liangzhen, Xia, Kelin, Mu, Yuguang
Published 2019

Persistent Dirac for molecular representation

by Wee, Junjie, Bianconi, Ginestra, Xia, Kelin
Published 2023

Molecular geometric deep learning

by Shen, Cong, Luo, Jiawei, Xia, Kelin
Published 2024

A complex multiscale virtual particle model based elastic network model (CMVP-ENM) for the normal mode analysis of biomolecular complexes

by Anand, D. Vijay, Meng, Zhenyu, Xia, Kelin
Published 2021

Multiresolution persistent homology for excessively large biomolecular datasets

by Xia, Kelin, Zhao, Zhixiong, Wei, Guo-Wei
Published 2016

Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM)

by Xia, Kelin, Opron, Kristopher, Wei, Guo-Wei
Published 2016

Fast and anisotropic flexibility-rigidity index for protein flexibility and fluctuation analysis

by Opron, Kristopher, Xia, Kelin, Wei, Guo-Wei
Published 2016

Multiscale multiphysics and multidomain models—Flexibility and rigidity

by Xia, Kelin, Opron, Kristopher, Wei, Guo-Wei
Published 2016

Communication: Capturing protein multiscale thermal fluctuations

by Opron, Kristopher, Xia, Kelin, Wei, Guo-Wei
Published 2016

Hypergraph-based persistent cohomology (HPC) for molecular representations in drug design

by Liu, Xiang, Wang, Xiangjun, Wu, Jie, Xia, Kelin
Published 2022