OPERA-LG: Efficient and exact scaffolding of large, repeat-rich eukaryotic genomes with performance guarantees

by Gao, S, Bertrand, D, Chia, B.K.H, Nagarajan, N
Published 2020

Candoxin, a novel toxin from Bungarus candidus, is a reversible antagonist of muscle (αβγδ) but a poorly reversible antagonist of neuronal α7 nicotinic acetylcholine receptors

by Nirthanan, S., Charpantier, E., Gopalakrishnakone, P., Gwee, M.C.E., Khoo, H.-E., Cheah, L.-S., Bertrand, D., Manjunatha Kini, R.
Published 2014

Neuromuscular effects of candoxin, a novel toxin from the venom of the Malayan krait (Bungarus candidus)

by Nirthanan, S., Gwee, M.C.E., Cheah, L.S., Gopalakrishnakone, P., Khoo, H.E., Charpantier, E., Bertrand, D., Kini, R.M.
Published 2012

Structural and functional characterization of a novel homodimeric three-finger neurotoxin from the venom of Ophiophagus hannah (King cobra)

by Roy, A., Zhou, X., Chong, M.Z., D'Hoedt, D., Foo, C.S., Rajagopalan, N., Nirthanan, S., Bertrand, D., Sivaraman, J., Manjunatha Kini, R.
Published 2014

Long-term ecological and evolutionary dynamics in the gut microbiomes of carbapenemase-producing Enterobacteriaceae colonized subjects

by Kang, JTL, Teo, JJY, Bertrand, D, Ng, A, Ravikrishnan, A, Yong, M, Ng, OT, Marimuthu, K, Chen, SL, Chng, KR, Gan, YH, Nagarajan, N
Published 2022

Duration of carbapenemase-producing enterobacteriaceae carriage in hospital patients

by Mo, Y., Hernandez-Koutoucheva, A., Musicha, P., Bertrand, D., Lye, D., Ng, O., Fenlon, S.N., Chen, S.L., Ling, M.L., Tang, W.Y., Barkham, T., Nagarajan, N., Cooper, B.S., Marimuthu, K.
Published 2021

Mutational spectrum of Barrett's stem cells suggests paths to initiation of a precancerous lesion

by Yamamoto Y., Wang X., Bertrand D., Kern F., Zhang T., Duleba M., Srivastava S., Khor C.C., Hu Y., Wilson L.H., Blaszyk H., Rolshud D., Teh M., Liu J., Howitt B.E., Vincent M., Crum C.P., Nagarajan N., Ho K.Y., McKeon F., Xian W.
Published 2020

Phenotype-driven precision oncology as a guide for clinical decisions one patient at a time

by Chia, S, Low, J.-L, Zhang, X, Kwang, X.-L, Chong, F.-T, Sharma, A, Bertrand, D, Toh, S.Y, Leong, H.-S, Thangavelu, M.T, Hwang, J.S.G, Lim, K.-H, Skanthakumar, T, Tan, H.-K, Su, Y, Hui Choo, S, Hentze, H, Tan, I.B.H, Lezhava, A, Tan, P, Tan, D.S.W, Periyasamy, G, Koh, J.L.Y, Gopalakrishna Iyer, N, Dasgupta, R
Published 2020

Whole-genome reconstruction and mutational signatures in gastric cancer

by Nagarajan N., Bertrand D., Hillmer A.M., Zang Z.J., Yao F., Jacques P., Teo A.S., Cutcutache I., Zhang Z., Lee W.H., Sia Y.Y., Gao S., Ariyaratne P.N., Ho A., Woo X.Y., Veeravali L., Ong C.K., Deng N., Desai K.V., Khor C.C., Hibberd M.L., Shahab A., Rao J., Wu M., Teh M., Zhu F., Chin S.Y., Pang B., So J.B., Bourque G., Soong R., Sung W.-K., Tean Teh B., Rozen S., Ruan X., Yeoh K.G., Tan P.B., Ruan Y.
Published 2018

Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes

by Zang, Z.J., Cutcutache, I., Poon, S.L., Zhang, S.L., Mcpherson, J.R., Tao, J., Rajasegaran, V., Heng, H.L., Deng, N., Gan, A., Lim, K.H., Ong, C.K., Huang, D., Chin, S.Y., Tan, I.B., Ng, C.C.Y., Yu, W., Wu, Y., Lee, M., Wu, J., Poh, D., Wan, W.K., Rha, S.Y., So, J., Salto-Tellez, M., Yeoh, K.G., Wong, W.K., Zhu, Y.-J., Futreal, P.A., Pang, B., Ruan, Y., Hillmer, A.M., Bertrand, D., Nagarajan, N., Rozen, S., Teh, B.T., Tan, P.
Published 2013

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

by Menden, M.P., Wang, D., Mason, M.J., Szalai, B., Bulusu, K.C., Guan, Y., Yu, T., Kang, J., Jeon, M., Wolfinger, R., Nguyen, T., Zaslavskiy, M., Abante, J., Abecassis, B.S., Aben, N., Aghamirzaie, D., Aittokallio, T., Akhtari, F.S., Al-lazikani, B., Alam, T., Allam, A., Allen, C., de Almeida, M.P., Altarawy, D., Alves, V., Amadoz, A., Anchang, B., Antolin, A.A., Ash, J.R., Aznar, V.R., Ba-alawi, W., Bagheri, M., Bajic, V., Ball, G., Ballester, P.J., Baptista, D., Bare, C., Bateson, M., Bender, A., Bertrand, D., Wijayawardena, B., Boroevich, K.A., Bosdriesz, E., Bougouffa, S., Bounova, G., Brouwer, T., Bryant, B., Calaza, M., Calderone, A., Calza, S., Capuzzi, S., Carbonell-Caballero, J., Carlin, D., Carter, H., Castagnoli, L., Celebi, R., Cesareni, G., Chang, H., Chen, G., Chen, H., Chen, H., Cheng, L., Chernomoretz, A., Chicco, D., Cho, K.-H., Cho, S., Choi, D., Choi, J., Choi, K., Choi, M., Cock, M.D., Coker, E., Cortes-Ciriano, I., Cserzö, M., Cubuk, C., Curtis, C., Daele, D.V., Dang, C.C., Dijkstra, T., Dopazo, J., Draghici, S., Drosou, A., Dumontier, M., Ehrhart, F., Eid, F.-E., ElHefnawi, M., Elmarakeby, H., van Engelen, B., Engin, H.B., de Esch, I., Evelo, C., Falcao, A.O., Farag, S., Fernandez-Lozano, C., Fisch, K., Flobak, A., Fornari, C., Foroushani, A.B.K., Fotso, D.C., Fourches, D., Friend, S., Frigessi, A., Gao, F., Gao, X., Gerold, J.M., Gestraud, P., Ghosh, S., Gillberg, J., Godoy-Lorite, A., Godynyuk, L., Godzik, A., Goldenberg, A., Gomez-Cabrero, D., Gonen, M., de Graaf, C., Gray, H., Grechkin, M., Guimera, R., Guney, E., Haibe-Kains, B., Han, Y., Hase, T., He, D., He, L., Heath, L.S., Hellton, K.H., Helmer-Citterich, M., Hidalgo, M.R., Hidru, D., Hill, S.M., Hochreiter, S., Hong, S., Hovig, E., Hsueh, Y.-C., Hu, Z., Huang, J.K., Huang, R.S., Hunyady, L., Hwang, J., Hwang, T.H., Hwang, W., Hwang, Y., Isayev, O., Don’t Walk, O.B., Jack, J., Jahandideh, S., Ji, J., Jo, Y., Kamola, P.J., Kanev, G.K., Karacosta, L., Karimi, M., Kaski, S., Kazanov, M., Khamis, A.M., Khan, S.A., Kiani, N.A., Kim, A., Kim, J., Kim, J., Kim, K., Kim, K., Kim, S., Kim, Y., Kim, Y., Kirk, P.D.W., Kitano, H., Klambauer, G., Knowles, D., Ko, M., Kohn-Luque, A., Kooistra, A.J., Kuenemann, M.A., Kuiper, M., Kurz, C., Kwon, M., van Laarhoven, T., Laegreid, A., Lederer, S., Lee, H., Lee, J., Lee, Y.W., Lepp_aho, E., Lewis, R., Li, J., Li, L., Liley, J., Lim, W.K., Lin, C., Liu, Y., Lopez, Y., Low, J., Lysenko, A., Machado, D., Madhukar, N., Maeyer, D.D., Malpartida, A.B., Mamitsuka, H., Marabita, F., Marchal, K., Marttinen, P., Mason, D., Mazaheri, A., Mehmood, A., Mehreen, A., Michaut, M., Miller, R.A., Mitsopoulos, C., Modos, D., Moerbeke, M.V., Moo, K., Motsinger-Reif, A., Movva, R., Muraru, S., Muratov, E., Mushthofa, M., Nagarajan, N., Nakken, S., Nath, A., Neuvial, P., Newton, R., Ning, Z., Niz, C.D., Oliva, B., Olsen, C., Palmeri, A., Panesar, B., Papadopoulos, S., Park, J., Park, S., Park, S., Pawitan, Y., Peluso, D., Pendyala, S., Peng, J., Perfetto, L., Pirro, S., Plevritis, S., Politi, R., Poon, H., Porta, E., Prellner, I., Preuer, K., Pujana, M.A., Ramnarine, R., Reid, J.E., Reyal, F., Richardson, S., Ricketts, C., Rieswijk, L., Rocha, M., Rodriguez-Gonzalvez, C., Roell, K., Rotroff, D., de Ruiter, J.R., Rukawa, P., Sadacca, B., Safikhani, Z., Safitri, F., Sales-Pardo, M., Sauer, S., Schlichting, M., Seoane, J.A., Serra, J., Shang, M.-M., Sharma, A., Sharma, H., Shen, Y., Shiga, M., Shin, M., Shkedy, Z., Shopsowitz, K., Sinai, S., Skola, D., Smirnov, P., Soerensen, I.F., Soerensen, P., Song, J.-H., Song, S.O., Soufan, O., Spitzmueller, A., Steipe, B., Suphavilai, C., Tamayo, S.P., Tamborero, D., Tang, J., Tanoli, Z.-U.-R., Tarres-Deulofeu, M., Tegner, J., Thommesen, L., Tonekaboni, S.A.M., Tran, H., Troyer, E.D., Truong, A.
Published 2021