The changing epidemiology of Plasmodium vivax: Insights from conventional and novel surveillance tools

by Sarah Auburn, Qin Cheng, Jutta Marfurt, Ric N. Price
Published 2022

A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes

by Sarah Auburn, Ulrike Böhme, Sascha Steinbiss, Hidayat Trimarsanto, Jessica Hostetler, Mandy Sanders, Qi Gao, Francois Nosten, Chris I. Newbold, Matthew Berriman, Ric N. Price, Thomas D. Otto
Published 2018

Where chloroquine still works: The genetic make-up and susceptibility of Plasmodium vivax to chloroquine plus primaquine in Bhutan

by Sonam Wangchuk, Tobgyel Drukpa, Kinley Penjor, Tashi Peldon, Yeshey Dorjey, Kunzang Dorji, Vishal Chhetri, Hidayat Trimarsanto, Sheren To, Amanda Murphy, Lorenz Von Seidlein, Ric N. Price, Kamala Thriemer, Sarah Auburn
Published 2018

Genomic Analysis Reveals a Common Breakpoint in Amplifications of the Plasmodium vivax Multidrug Resistance 1 Locus in Thailand

by Sarah Auburn, David Serre, Richard D. Pearson, Roberto Amato, Kanlaya Sriprawat, Sheren To, Irene Handayuni, Rossarin Suwanarusk, Bruce Russell, Eleanor Drury, Jim Stalker, Olivo Miotto, Dominic P. Kwiatkowski, Francois Nosten, Ric N. Price
Published 2018

Wide range of G6PD activities found among ethnic groups of the Chittagong Hill Tracts, Bangladesh

by Benedikt Ley, Mohammad Golam Kibria, Wasif Ali Khan, Sarah Auburn, Ching Swe Phru, Nusrat Jahan, Fatema Tuj Johora, Kamala Thriemer, Jenifar Quaiyum Ami, Mohammad Sharif Hossain, Ric N. Price, Cristian Koepfli, Mohammad Shafiul Alam
Published 2020

Glucose-6-phosphate dehydrogenase activity in individuals with and without malaria: Analysis of clinical trial, cross-sectional and case–control data from Bangladesh

by Benedikt Ley, Mohammad Shafiul Alam, Mohammad Golam Kibria, Jutta Marfurt, Ching Swe Phru, Jenifar Quaiyum Ami, Kamala Thriemer, Sarah Auburn, Nusrat Jahan, Fatema Tuj Johora, Mohammad Sharif Hossain, Cristian Koepfli, Wasif Ali Khan, Ric N. Price
Published 2022

Characterization of within-host plasmodium falciparum diversity using next-generation sequence data

by Sarah Auburn, Susana Campino, Olivo Miotto, Abdoulaye A. Djimde, Issaka Zongo, Magnus Manske, Gareth Maslen, Valentina Mangano, Daniel Alcock, Bronwyn MacInnis, Kirk A. Rockett, Taane G. Clark, Ogobara K. Doumbo, Jean Bosco Ouédraogo, Dominic P. Kwiatkowski
Published 2018

Review of key knowledge gaps in glucose-6-phosphate dehydrogenase deficiency detection with regard to the safe clinical deployment of 8-aminoquinoline treatment regimens: A worksho...

by Lorenz Von Seidlein, Sarah Auburn, Fe Espino, Dennis Shanks, Qin Cheng, James McCarthy, Kevin Baird, Catherine Moyes, Rosalind Howes, Didier Ménard, Germana Bancone, Ari Winasti-Satyahraha, Lasse S. Vestergaard, Justin Green, Gonzalo Domingo, Shunmay Yeung, Ric Price
Published 2018

Dihydrofolate-reductase mutations in plasmodium knowlesi appear unrelated to selective drug pressure from putative human-to-human transmission in Sabah, Malaysia

by Matthew J. Grigg, Bridget E. Barber, Jutta Marfurt, Mallika Imwong, Timothy William, Elspeth Bird, Kim A. Piera, Ammar Aziz, Usa Boonyuen, Christopher J. Drakeley, Jonathan Cox, Nicholas J. White, Qin Cheng, Tsin W. Yeo, Sarah Auburn, Nicholas M. Anstey
Published 2018

Molecular surveillance over 14 years confirms reduction of Plasmodium vivax and falciparum transmission after implementation of Artemisinin-based combination therapy in Papua, Indo...

by Zuleima Pava, Agatha M. Puspitasari, Angela Rumaseb, Irene Handayuni, Leily Trianty, Retno A.S. Utami, Yusrifar K. Tirta, Faustina Burdam, Enny Kenangalem, Grennady Wirjanata, Steven Kho, Hidayat Trimarsanto, Nicholas M. Anstey, Jeanne Rini Poespoprodjo, Rintis Noviyanti, Ric N. Price, Jutta Marfurt, Sarah Auburn
Published 2020

Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics

by Sarah Auburn, Ernest D. Benavente, Olivo Miotto, Richard D. Pearson, Roberto Amato, Matthew J. Grigg, Bridget E. Barber, Timothy William, Irene Handayuni, Jutta Marfurt, Hidayat Trimarsanto, Rintis Noviyanti, Kanlaya Sriprawat, Francois Nosten, Susana Campino, Taane G. Clark, Nicholas M. Anstey, Dominic P. Kwiatkowski, Ric N. Price
Published 2019

Effective Preparation of Plasmodium vivax Field Isolates for High-Throughput Whole Genome Sequencing

by Sarah Auburn, Jutta Marfurt, Gareth Maslen, Susana Campino, Valentin Ruano Rubio, Magnus Manske, Barbara MacHunter, Enny Kenangalem, Rintis Noviyanti, Leily Trianty, Boni Sebayang, Grennady Wirjanata, Kanlaya Sriprawat, Daniel Alcock, Bronwyn MacInnis, Olivo Miotto, Taane G. Clark, Bruce Russell, Nicholas M. Anstey, François Nosten, Dominic P. Kwiatkowski, Ric N. Price
Published 2018

Longitudinal ex vivo and molecular trends of chloroquine and piperaquine activity against Plasmodium falciparum and P. vivax before and after introduction of artemisinin-based comb...

by Jutta Marfurt, Grennady Wirjanata, Pak Prayoga, Ferryanto Chalfein, Leo Leonardo, Boni F. Sebayang, Dwi Apriyanti, Maic A.E.M. Sihombing, Leily Trianty, Rossarin Suwanarusk, Alan Brockman, Kim A. Piera, Irene Luo, Angela Rumaseb, Barbara MacHunter, Sarah Auburn, Nicholas M. Anstey, Enny Kenangalem, Rintis Noviyanti, Bruce Russell, Jeanne R. Poespoprodjo, Ric N. Price
Published 2022

Genomic Analysis of Plasmodium vivax in Southern Ethiopia Reveals Selective Pressures in Multiple Parasite Mechanisms

by Sarah Auburn, Sisay Getachew, Richard D. Pearson, Roberto Amato, Olivo Miotto, Hidayat Trimarsanto, Sha Joe Zhu, Angela Rumaseb, Jutta Marfurt, Rintis Noviyanti, Matthew J. Grigg, Bridget Barber, Timothy William, Sonia Morgado Goncalves, Eleanor Drury, Kanlaya Sriprawat, Nicholas M. Anstey, Francois Nosten, Beyene Petros, Abraham Aseffa, Gil McVean, Dominic P. Kwiatkowski, Ric N. Price
Published 2020

Implementing parasite genotyping into national surveillance frameworks: feedback from control programmes and researchers in the Asia-Pacific region

by Rintis Noviyanti, Olivo Miotto, Alyssa Barry, Jutta Marfurt, Sasha Siegel, Nguyen Thuy-Nhien, Huynh Hong Quang, Nancy Dian Anggraeni, Ferdinand Laihad, Yaobao Liu, Maria Endang Sumiwi, Hidayat Trimarsanto, Farah Coutrier, Nadia Fadila, Najia Ghanchi, Fatema Tuj Johora, Agatha Mia Puspitasari, Livingstone Tavul, Leily Trianty, Retno Ayu Setya Utami, Duoquan Wang, Kesang Wangchuck, Ric N. Price, Sarah Auburn
Published 2020

Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea

by Olivo Miotto, Makoto Sekihara, Shin Ichiro Tachibana, Masato Yamauchi, Richard D. Pearson, Roberto Amato, Sonia Gonçalves, Somya Mehra, Rintis Noviyanti, Jutta Marfurt, Sarah Auburn, Ric N. Price, Ivo Mueller, Mie Ikeda, Toshiyuki Mori, Makoto Hirai, Livingstone Tavul, Manuel W. Hetzel, Moses Laman, Alyssa E. Barry, Pascal Ringwald, Jun Ohashi, Francis Hombhanje, Dominic P. Kwiatkowski, Toshihiro Mita
Published 2021

Genetic diversity and neutral selection in Plasmodium vivax erythrocyte binding protein correlates with patient antigenicity

by Jin Hee Han, Jee Sun Cho, Jessica J.Y. Ong, Ji Hoon Park, Myat Htut Nyunt, Edwin Sutanto, Hidayat Trimarsanto, Beyene Petros, Abraham Aseffa, Sisay Getachew, Kanlaya Sriprawat, Nicholas M. Anstey, Matthew J. Grigg, Bridget E. Barber, Timothy William, Gao Qi, Yaobao Liu, Richard D. Pearson, Sarah Auburn, Ric N. Price, Francois Nosten, Laurent Rénia, Bruce Russell, Eun Taek Han
Published 2020

Geographical distribution and genetic diversity of Plasmodium vivax reticulocyte binding protein 1a correlates with patient antigenicity

by Ji Hoon Park, Min Hee Kim, Edwin Sutanto, Seok Won Na, Min Jae Kim, Joon Sup Yeom, Myat Htut Nyunt, Mohammed Mohieldien Abbas Elfaki, Muzamil Mahdi Abdel Hamid, Seok Ho Cha, Sisay Getachew Alemu, Kanlaya Sriprawat, Nicholas M. Anstey, Matthew J. Grigg, Bridget E. Barber, Timothy William, Qi Gao, Yaobao Liu, Richard D. Pearson, Ric N. Price, Francois Nosten, Sung Il Yoon, Joo Hwan No, Eun Taek Han, Sarah Auburn, Bruce Russell, Jin Hee Han
Published 2022

Population genetic analysis of plasmodium falciparum parasites using a customized illumina goldengate genotyping assay

by Susana Campino, Sarah Auburn, Katja Kivinen, Issaka Zongo, Jean Bosco Ouedraogo, Valentina Mangano, Abdoulaye Djimde, Ogobara K. Doumbo, Steven M. Kiara, Alexis Nzila, Steffen Borrmann, Kevin Marsh, Pascal Michon, Ivo Mueller, Peter Siba, Hongying Jiang, Xin Zhuan Su, Chanaki Amaratunga, Duong Socheat, Rick M. Fairhurst, Mallika Imwong, Timothy Anderson, François Nosten, Nicholas J. White, Rhian Gwilliam, Panos Deloukas, Bronwyn MacInnis, Christopher I. Newbold, Kirk Rockett, Taane G. Clark, Dominic P. Kwiatkowski
Published 2018

Genomic analysis of local variation and recent evolution in Plasmodium vivax

by Richard D. Pearson, Roberto Amato, Sarah Auburn, Olivo Miotto, Jacob Almagro-Garcia, Chanaki Amaratunga, Seila Suon, Sivanna Mao, Rintis Noviyanti, Hidayat Trimarsanto, Jutta Marfurt, Nicholas M. Anstey, Timothy William, MacIej F. Boni, Christiane Dolecek, Hien Tinh Tran, Nicholas J. White, Pascal Michon, Peter Siba, Livingstone Tavul, Gabrielle Harrison, Alyssa Barry, Ivo Mueller, Marcelo U. Ferreira, Nadira Karunaweera, Milijaona Randrianarivelojosia, Qi Gao, Christina Hubbart, Lee Hart, Ben Jeffery, Eleanor Drury, Daniel Mead, Mihir Kekre, Susana Campino, Magnus Manske, Victoria J. Cornelius, Bronwyn MacInnis, Kirk A. Rockett, Alistair Miles, Julian C. Rayner, Rick M. Fairhurst, Francois Nosten, Ric N. Price, Dominic P. Kwiatkowski
Published 2018