Survival of starved Aedes aegypti (Diptera: Culicidae) in Puerto Rico and Thailand

by Adriana Costero, John D. Edman, Gary G. Clark, Pattamaporn Kittayapong, Thomas W. Scott
Published 2018

Extended linkage disequilibrium surrounding the hemoglobin E variant due to malarial selection

by Jun Ohashi, Izumi Naka, Jintana Patarapotikul, Hathairad Hananantachai, Gary Brittenham, Sornchai Looareesuwan, Andrew G. Clark, Katsushi Tokunaga
Published 2018

Strong linkage disequilibrium of a HbE variant with the (AT) <inf>9</inf>(T)<inf>5</inf> repeat in the BP1 binding site upstream of the β-globin gene in the Thai population

by Jun Ohashi, Izumi Naka, Jintana Patarapotikul, Hathairad Hananantachai, Gary Brittenham, Sornchai Looareesuwan, Andrew G. Clark, Katsushi Tokunaga
Published 2018

Analysis of survival of young and old Aedes aegypti (Diptera: Culicidae) from Puerto Rico and Thailand

by Laura C. Harrington, John P. Buonaccorsi, John D. Edman, Adriana Costero, Pattamaporn Kittayapong, Gary G. Clark, Thomas W. Scott
Published 2018

Longitudinal studies of Aedes aegypti (Diptera: Culicidae) in Thailand and Puerto Rico: Population dynamics

by Thomas W. Scott, Amy C. Morrison, Leslie H. Lorenz, Gary G. Clark, Daniel Strickman, Pattamaporn Kittayapong, Hong Zhou, John D. Edman
Published 2018

Longitudinal studies of aedes aegypti (diptera: Culicidae) in thailand and puerto rico: Blood feeding frequency

by Thomas W. Scott, Priyanie H. Amerasinghe, Amy C. Morrison, Leslie H. Lorenz, Gary G. Clark, Daniel Strickman, Pattamaporn Kittayapong, John D. Edman
Published 2018

Genetic signatures of Mycobacterium tuberculosis Nonthaburi genotype revealed by whole genome analysis of isolates from tuberculous meningitis patients in Thailand

by Olabisi Oluwabukola Coker, Angkana Chaiprasert, Chumpol Ngamphiw, Sissades Tongsima, Sanjib Mani Regmi, Taane G. Clark, Rick Twee Hee Ong, Yik Ying Teo, Therdsak Prammananan, Prasit Palittapongarnpim
Published 2018

Dispersal of the dengue vector Aedes aegypti within and between rural communities

by Laura C. Harrington, Thomas W. Scott, Kriangkrai Lerdthusnee, Russell C. Coleman, Adriana Costero, Gary G. Clark, James J. Jones, Sangvorn Kitthawee, Pattamaporn Kittayapong, Ratana Sithiprasasna, John D. Edman
Published 2018

Clusters of drug-resistant mycobacterium tuberculosis detected by whole-genome sequence analysis of nationwide sample, Thailand, 2014–2017

by Ditthawat Nonghanphithak, Angkana Chaiprasert, Saijai Smithtikarn, Phalin Kamolwat, Petchawan Pungrassami, Virasakdi Chongsuvivatwong, Surakameth Mahasirimongkol, Wipa Reechaipichitkul, Chaniya Leepiyasakulchai, Jody E. Phelan, David Blair, Taane G. Clark, Kiatichai Faksri
Published 2022

An in-solution hybridisation method for the isolation of pathogen DNA from human DNA-rich clinical samples for analysis by NGS

by Miriam Smith, Susana Campino, Yong Gu, Taane G. Clark, Thomas D. Otto, Gareth Maslen, Magnus Manske, Mallika Imwong, Arjen M. Dondorp, Dominic P. Kwiatkowski, Michael A. Quail, Harold Swerdlow
Published 2018

Selective whole genome amplification of Plasmodium malariae DNA from clinical samples reveals insights into population structure

by Amy Ibrahim, Ernest Diez Benavente, Debbie Nolder, Stephane Proux, Matthew Higgins, Julian Muwanguzi, Paula Josefina Gomez Gonzalez, Hans Peter Fuehrer, Cally Roper, Francois Nosten, Colin Sutherland, Taane G. Clark, Susana Campino
Published 2020

A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria

by Ernest Diez Benavente, Monica Campos, Jody Phelan, Debbie Nolder, Jamille G. Dombrowski, Claudio R.F. Marinho, Kanlaya Sriprawat, Aimee R. Taylor, James Watson, Cally Roper, Francois Nosten, Colin J. Sutherland, Susana Campino, Taane G. Clark
Published 2020

Genomic evidence supporting the clonal expansion of extensively drug-resistant tuberculosis bacteria belonging to a rare proto-Beijing genotype

by Prapaporn Srilohasin, Therdsak Prammananan, Kiatichai Faksri, Jody E. Phelan, Prapat Suriyaphol, Phalin Kamolwat, Saijai Smithtikarn, Areeya Disratthakit, Sanjib Mani Regmi, Manoon Leechawengwongs, Rick Twee-Hee Ong, Yik Ying Teo, Sissades Tongsima, Taane G. Clark, Angkana Chaiprasert
Published 2020

Characterization of within-host plasmodium falciparum diversity using next-generation sequence data

by Sarah Auburn, Susana Campino, Olivo Miotto, Abdoulaye A. Djimde, Issaka Zongo, Magnus Manske, Gareth Maslen, Valentina Mangano, Daniel Alcock, Bronwyn MacInnis, Kirk A. Rockett, Taane G. Clark, Ogobara K. Doumbo, Jean Bosco Ouédraogo, Dominic P. Kwiatkowski
Published 2018

Variation in human genes encoding adhesion and proinflammatory molecules are associated with severe malaria in the Vietnamese

by S. J. Dunstan, K. A. Rockett, N. T N Quyen, Y. Y. Teo, C. Q. Thai, N. T. Hang, A. Jeffreys, T. G. Clark, K. S. Small, C. P. Simmons, N. Day, S. E. O'Riordan, D. P. Kwiatkowski, J. Farrar, N. H. Phu, T. T. Hien
Published 2018

Distinctive genetic structure and selection patterns in Plasmodium vivax from South Asia and East Africa

by Ernest Diez Benavente, Emilia Manko, Jody Phelan, Monica Campos, Debbie Nolder, Diana Fernandez, Gabriel Velez-Tobon, Alberto Tobón Castaño, Jamille G. Dombrowski, Claudio R.F. Marinho, Anna Caroline C. Aguiar, Dhelio Batista Pereira, Kanlaya Sriprawat, Francois Nosten, Robert Moon, Colin J. Sutherland, Susana Campino, Taane G. Clark
Published 2022

Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics

by Sarah Auburn, Ernest D. Benavente, Olivo Miotto, Richard D. Pearson, Roberto Amato, Matthew J. Grigg, Bridget E. Barber, Timothy William, Irene Handayuni, Jutta Marfurt, Hidayat Trimarsanto, Rintis Noviyanti, Kanlaya Sriprawat, Francois Nosten, Susana Campino, Taane G. Clark, Nicholas M. Anstey, Dominic P. Kwiatkowski, Ric N. Price
Published 2019

Plasmo View: A web-based resource to visualise global Plasmodium falciparum genomic variation

by Mark D. Preston, Samuel A. Assefa, Harold Ocholla, Colin J. Sutherland, Steffen Borrmann, Alexis Nzila, Pascal Michon, Tran Tinh Hien, Teun Bousema, Christopher J. Drakeley, Issaka Zongo, Jean Bosco Ouédraogo, Abdoulaye A. Djimde, Ogobara K. Doumbo, Francois Nosten, Rick M. Fairhurst, David J. Conway, Cally Roper, Taane G. Clark
Published 2018

Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates

by Prasit Palittapongarnpim, Pravech Ajawatanawong, Wasna Viratyosin, Nat Smittipat, Areeya Disratthakit, Surakameth Mahasirimongkol, Hideki Yanai, Norio Yamada, Supalert Nedsuwan, Worarat Imasanguan, Pacharee Kantipong, Boonchai Chaiyasirinroje, Jiraporn Wongyai, Licht Toyo-oka, Jody Phelan, Julian Parkhill, Taane G. Clark, Martin L. Hibberd, Wuthiwat Ruengchai, Panawun Palittapongarnpim, Tada Juthayothin, Sissades Tongsima, Katsushi Tokunaga
Published 2019

Effective Preparation of Plasmodium vivax Field Isolates for High-Throughput Whole Genome Sequencing

by Sarah Auburn, Jutta Marfurt, Gareth Maslen, Susana Campino, Valentin Ruano Rubio, Magnus Manske, Barbara MacHunter, Enny Kenangalem, Rintis Noviyanti, Leily Trianty, Boni Sebayang, Grennady Wirjanata, Kanlaya Sriprawat, Daniel Alcock, Bronwyn MacInnis, Olivo Miotto, Taane G. Clark, Bruce Russell, Nicholas M. Anstey, François Nosten, Dominic P. Kwiatkowski, Ric N. Price
Published 2018